Iyer, Lakshminarayan M.: search on Z-Library

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1

Natural history of the E1-like superfamily: Implication for adenylation, sulfur transfer, and ubiquitin conjugation

A. Maxwell Burroughs, Lakshminarayan M. Iyer, L. Aravind

Journal:

Proteins: Structure, Function, and Bioinformatics

Year:

2009

Language:

english

File:

PDF, 754 KB

english, 2009

2

Adenine methylation in eukaryotes: Apprehending the complex evolutionary history and functional potential of an epigenetic modification

Iyer, Lakshminarayan M., Zhang, Dapeng, Aravind, L.

Journal:

Year:

2016

Language:

english

File:

PDF, 8.47 MB

english, 2016

3

The many faces of the helix-turn-helix domain: Transcription regulation and beyond

L. Aravind, Vivek Anantharaman, Santhanam Balaji, M. Mohan Babu, Lakshminarayan M. Iyer

Journal:

FEMS Microbiology Reviews

Year:

2005

Language:

english

File:

PDF, 5.79 MB

english, 2005

4

Genome intruder scanning and modulation systems and transgene silencing

Siva P. Kumpatla, Mahesh B. Chandrasekharan, Lakshminarayan M. Iyer, Li Guofu, Timothy C. Hall

Journal:

Trends in Plant Science

Year:

1998

Language:

english

File:

PDF, 942 KB

english, 1998

5

The catalytic core of DEMETER guides active DNA demethylation in Arabidopsis

Zhang, Changqing, Hung, Yu-Hung, Rim, Hyun Jung, Zhang, Dapeng, Frost, Jennifer M., Shin, Hosub, Jang, Hosung, Liu, Fang, Xiao, Wenyan, Iyer, Lakshminarayan M., Aravind, L., Zhang, Xiang-Qian, Fischer

Journal:

Proceedings of the National Academy of Sciences

Year:

2019

Language:

english

File:

PDF, 1.12 MB

english, 2019

6

Comparative Genomics of Protists: New Insights into the Evolution of Eukaryotic Signal Transduction and Gene Regulation *

Anantharaman, Vivek, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Annual Review of Microbiology

Year:

2007

Language:

english

File:

PDF, 1.08 MB

english, 2007

7

Austenite stabilization in stainless steel by hydrogen

Iyer, K.J. Lakshminarayans, Ramachandran, E. Ganapathiiyer, Ruge, Jürgen

Journal:

Archiv für das Eisenhüttenwesen

Year:

1978

Language:

english

File:

PDF, 237 KB

english, 1978

8

Comparative genomics of transcription factors and chromatin proteins in parasitic protists and other eukaryotes

Lakshminarayan M. Iyer, Vivek Anantharaman, Maxim Y. Wolf, L. Aravind

Journal:

International Journal for Parasitology

Year:

2008

Language:

english

File:

PDF, 2.50 MB

english, 2008

9

Polymorphic toxin systems: Comprehensive characterization of trafficking modes, processing, mechanisms of action, immunity and ecology using comparative genomics

Dapeng Zhang, Robson F de Souza, Vivek Anantharaman, Lakshminarayan M Iyer, L Aravind

Journal:

Year:

2012

Language:

english

File:

PDF, 5.40 MB

english, 2012

10

Small but versatile: the extraordinary functional and structural diversity of the β-grasp fold

A Maxwell Burroughs, S Balaji, Lakshminarayan M Iyer, L Aravind

Journal:

Year:

2007

Language:

english

File:

PDF, 3.11 MB

english, 2007

11

The prokaryotic antecedents of the ubiquitin-signaling system and the early evolution of ubiquitin-like β-grasp domains

Lakshminarayan M Iyer, A Maxwell Burroughs, L Aravind

Journal:

Year:

2006

Language:

english

File:

PDF, 4.03 MB

english, 2006

12

Mycobacterium tuberculosis Rv0991c Is a Redox-Regulated Molecular Chaperone

Becker, Samuel H., Ulrich, Kathrin, Dhabaria, Avantika, Ueberheide, Beatrix, Beavers, William, Skaar, Eric P., Iyer, Lakshminarayan M., Aravind, L., Jakob, Ursula, Darwin, K. Heran, Gottesman, Susan

Journal:

Year:

2020

File:

PDF, 1.54 MB

2020

13

Transgene silencing in monocots

Lakshminarayan M. Iyer, Siva P. Kumpatla, Mahesh B. Chandrasekharan, Timothy C. Hall

Journal:

Plant Molecular Biology

Year:

2000

Language:

english

File:

PDF, 257 KB

english, 2000

14

The catalytic domains of thiamine triphosphatase and CyaB-like adenylyl cyclase define a novel superfamily of domains that bind organic phosphates

Lakshminarayan M Iyer, L Aravind

Journal:

Year:

2002

Language:

english

File:

PDF, 860 KB

english, 2002

15

Uncovering a Hidden Distributed Architecture Behind Scale-free Transcriptional Regulatory Networks

S. Balaji, Lakshminarayan M. Iyer, L. Aravind, M. Madan Babu

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 463 KB

english, 2006

16

Estimating the Prevalence and Regulatory Potential of the Telomere Looping Effect in Yeast Transcription Regulation

Babu, Madan, Balaji, S, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Year:

2006

File:

PDF, 1.00 MB

2006

17

Evolutionary connection between the catalytic subunits of DNA-dependent RNA polymerases and eukaryotic RNA-dependent RNA polymerases and the origin of RNA polymerases

Lakshminarayan M Iyer, Eugene V Koonin, L Aravind

Journal:

BMC Structural Biology

Year:

2003

Language:

english

File:

PDF, 3.09 MB

english, 2003

18

Assessment of Penetrance and Expressivity of RNAi-Mediated Silencing of the Arabidopsis phytoene desaturase Gene

Tao Wang, Lakshminarayan M. Iyer, Rakesh Pancholy, Xiangyu Shi and Timothy C. Hall

Journal:

New Phytologist

Year:

2005

Language:

english

File:

PDF, 2.05 MB

english, 2005

19

Domain Architectures of the Scm3p Protein Provide Insights into Centromere Function and Evolution

Aravind, L., Iyer, Lakshminarayan M., Wu, Carl

Journal:

Year:

2007

Language:

english

File:

PDF, 1.03 MB

english, 2007

20

The HIRAN Domain and Recruitment of Chromatin Remodeling and Repair activities to Damaged DNA

Iyer, Lakshminarayan M., Babu, Madan, Aravind, L.

Journal:

Year:

2006

Language:

english

File:

PDF, 937 KB

english, 2006

21

Predicted class-I aminoacyl tRNA synthetase-like proteins in non-ribosomal peptide synthesis

L Aravind, Robson F de Souza, Lakshminarayan M Iyer

Journal:

Year:

2010

Language:

english

File:

PDF, 2.70 MB

english, 2010

22

Comprehensive Analysis of Combinatorial Regulation using the Transcriptional Regulatory Network of Yeast

S. Balaji, M. Madan Babu, Lakshminarayan M. Iyer, Nicholas M. Luscombe, L. Aravind

Journal:

Journal of Molecular Biology

Year:

2006

Language:

english

File:

PDF, 770 KB

english, 2006

23

Provenance of SET-Domain Histone Methyltransferases Through Duplication of a Simple Structural Unit

Aravind, L., Iyer, Lakshminarayan M.

Journal:

Year:

2003

Language:

english

File:

PDF, 1.53 MB

english, 2003

24

Ancient conserved domains shared by animal soluble guanylyl cyclases and bacterial signaling proteins

Lakshminarayan M Iyer, Vivek Anantharaman, L Aravind

Journal:

Year:

2003

Language:

english

File:

PDF, 312 KB

english, 2003

25

Ter-dependent stress response systems: novel pathways related to metal sensing, production of a nucleoside-like metabolite, and DNA-processing

Anantharaman, Vivek, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Molecular BioSystems

Year:

2012

Language:

english

File:

PDF, 5.68 MB

english, 2012

26

A novel family of P-loop NTPases with an unusual phyletic distribution and transmembrane segments inserted within the NTPase domain

L Aravind, Lakshminarayan M Iyer, Detlef D Leipe, Eugene V Koonin

Journal:

Year:

2004

Language:

english

File:

PDF, 373 KB

english, 2004

27

Proteasomal Control of Cytokinin Synthesis Protects Mycobacterium tuberculosis against Nitric Oxide

Samanovic, Marie I., Tu, Shengjiang, Novák, Ondřej, Iyer, Lakshminarayan M., McAllister, Fiona E., Aravind, L., Gygi, Steven P., Hubbard, Stevan R., Strnad, Miroslav, Darwin, K. Heran

Journal:

Year:

2015

Language:

english

File:

PDF, 2.25 MB

english, 2015

28

Lineage-specific expansions of TET/JBP genes and a new class of DNA transposons shape fungal genomic and epigenetic landscapes

Iyer, Lakshminarayan M., Zhang, Dapeng, de Souza, Robson F., Pukkila, Patricia J., Rao, Anjana, Aravind, L.

Journal:

Proceedings of the National Academy of Sciences

Year:

2014

Language:

english

File:

PDF, 1.07 MB

english, 2014

29

Expansions, diversification, and interindividual copy number variations of AID/APOBEC family cytidine deaminase genes in lampreys

Holland, Stephen J., Berghuis, Lesley M., King, Justin J., Iyer, Lakshminarayan M., Sikora, Katarzyna, Fifield, Heather, Peter, Sarah, Quinlan, Emma M., Sugahara, Fumiaki, Shingate, Prashant, Trancoso

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 2.14 MB

english, 2018

30

The SWIRM domain: a conserved module found in chromosomal proteins points to novel chromatin-modifying activities

L Aravind, Lakshminarayan M Iyer

Journal:

Year:

2002

Language:

english

File:

PDF, 148 KB

english, 2002

31

The two faces of Alba: the evolutionary connection between proteins participating in chromatin structure and RNA metabolism

L Aravind, Lakshminarayan M Iyer, Vivek Anantharaman

Journal:

Year:

2003

Language:

english

File:

PDF, 362 KB

english, 2003

32

HPC2 and ubinuclein define a novel family of histone chaperones conserved throughout eukaryotes

Balaji, S., Iyer, Lakshminarayan M., Aravind, L.

Journal:

Molecular BioSystems

Year:

2009

Language:

english

File:

PDF, 1.69 MB

english, 2009

33

Functional diversification of the RING finger and other binuclear treble clef domains in prokaryotes and the early evolution of the ubiquitin system

Burroughs, A. Maxwell, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Molecular BioSystems

Year:

2011

Language:

english

File:

PDF, 4.89 MB

english, 2011

34

Diversification of AID/APOBEC-like deaminases in metazoa: multiplicity of clades and widespread roles in immunity

Krishnan, Arunkumar, Iyer, Lakshminarayan M., Holland, Stephen J., Boehm, Thomas, Aravind, L.

Journal:

Proceedings of the National Academy of Sciences

Year:

2018

Language:

english

File:

PDF, 1.73 MB

english, 2018

35

Structure of a lamprey variable lymphocyte receptor in complex with a protein antigen

Velikovsky, C Alejandro, Deng, Lu, Tasumi, Satoshi, Iyer, Lakshminarayan M, Kerzic, Melissa C, Aravind, L, Pancer, Zeev, Mariuzza, Roy A

Journal:

Nature Structural and Molecular Biology

Year:

2009

Language:

english

File:

PDF, 677 KB

english, 2009

36

MutL homologs in restriction-modification systems and the origin of eukaryotic MORC ATPases

Lakshminarayan M Iyer, Saraswathi Abhiman, L Aravind

Journal:

Year:

2008

Language:

english

File:

PDF, 975 KB

english, 2008

37

Novel autoproteolytic and DNA-damage sensing components in the bacterial SOS response and oxidized methylcytosine-induced eukaryotic DNA demethylation systems

Aravind, L, Anand, Swadha, Iyer, Lakshminarayan M

Journal:

Year:

2013

Language:

english

File:

PDF, 1018 KB

english, 2013

38

Resilience of biochemical activity in protein domains in the face of structural divergence

Zhang, Dapeng, Iyer, Lakshminarayan M, Burroughs, A Maxwell, Aravind, L

Journal:

Current Opinion in Structural Biology

Year:

2014

Language:

english

File:

PDF, 2.29 MB

english, 2014

39

Amidoligases with ATP-grasp, glutamine synthetase-like and acetyltransferase-like domains: synthesis of novel metabolites and peptide modifications of proteins

Iyer, Lakshminarayan M., Abhiman, Saraswathi, Maxwell Burroughs, A., Aravind, L.

Journal:

Molecular BioSystems

Year:

2009

Language:

english

File:

PDF, 5.26 MB

english, 2009

40

Prediction of novel families of enzymes involved in oxidative and other complex modifications of bases in nucleic acids

Iyer, Lakshminarayan M., Tahiliani, Mamta, Rao, Anjana, Aravind, L.

Journal:

Year:

2009

Language:

english

File:

PDF, 1.66 MB

english, 2009

41

The HARE-HTH and associated domains

Aravind, L., Iyer, Lakshminarayan M.

Journal:

Year:

2012

Language:

english

File:

PDF, 10.81 MB

english, 2012

42

Evolution and diversification of lamprey antigen receptors: evidence for involvement of an AID-APOBEC family cytosine deaminase

Rogozin, Igor B, Iyer, Lakshminarayan M, Liang, Lizhi, Glazko, Galina V, Liston, Victoria G, Pavlov, Youri I, Aravind, L, Pancer, Zeev

Journal:

Nature Immunology

Year:

2007

Language:

english

File:

PDF, 344 KB

english, 2007

43

Comparison of transcription regulatory interactions inferred from high-throughput methods: what do they reveal?

S. Balaji, Lakshminarayan M. Iyer, M. Madan Babu, L. Aravind

Journal:

Trends in Genetics

Year:

2008

Language:

english

File:

PDF, 455 KB

english, 2008

44

Two novel PIWI families: roles in inter-genomic conflicts in bacteria and Mediator-dependent modulation of transcription in eukaryotes

A Maxwell Burroughs, Lakshminarayan M Iyer, L Aravind

Journal:

Year:

2013

Language:

english

File:

PDF, 3.14 MB

english, 2013

45

Classification and evolutionary history of the single-strand annealing proteins, RecT, Redβ, ERF and RAD52

Lakshminarayan M Iyer, Eugene V Koonin, L Aravind

Journal:

Year:

2002

Language:

english

File:

PDF, 312 KB

english, 2002

46

Transcription factors, chromatin proteins and the diversification of Hemiptera

Vidal, Newton M., Grazziotin, Ana Laura, Iyer, Lakshminarayan M., Aravind, L., Venancio, Thiago M.

Journal:

Insect Biochemistry and Molecular Biology

Year:

2015

Language:

english

File:

PDF, 1.81 MB

english, 2015

47

Estimating the Prevalence and Regulatory Potential of the Telomere Looping Effect in Yeast Transcription Regulation

Babu, Madan, Balaji, S, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Year:

2006

Language:

english

File:

PDF, 1.00 MB

english, 2006

48

Discovery of Novel DENN Proteins: Implications for the Evolution of Eukaryotic Intracellular Membrane Structures and Human Disease

Zhang, Dapeng, Iyer, Lakshminarayan M., He, Fang, Aravind, L.

Journal:

Frontiers in Genetics

Year:

2012

Language:

english

File:

PDF, 2.24 MB

english, 2012

49

Unexpected Evolution of Lesion-Recognition Modules in Eukaryotic NER and Kinetoplast DNA Dynamics Proteins from Bacterial Mobile Elements

Krishnan, Arunkumar, Burroughs, A. Maxwell, Iyer, Lakshminarayan M., Aravind, L.

Journal:

Year:

2018

Language:

english

File:

PDF, 6.77 MB

english, 2018

50

The cyl Genes Reveal the Biosynthetic and Evolutionary Origins of the Group B Streptococcus Hemolytic Lipid, Granadaene

Armistead, Blair, Whidbey, Christopher, Iyer, Lakshminarayan M., Herrero-Foncubierta, Pilar, Quach, Phoenicia, Haidour, Ali, Aravind, L., Cuerva, Juan Manuel, Jaspan, Heather B., Rajagopal, Lakshmi

Journal:

Frontiers in Microbiology

Year:

2020

File:

PDF, 2.55 MB

2020

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